What Is the Vaginal Microbiome?
The vaginal microbiome is a diverse and dynamic ecosystem of bacteria that plays a vital role in women’s reproductive health, immune function, and overall wellbeing. Dominated primarily by Lactobacillus species, this microbiome maintains a slightly acidic pH that protects against infections like bacterial vaginosis (BV), yeast infections, and sexually transmitted infections (STIs).
When this microbial balance is disrupted—a condition known as vaginal dysbiosis—the risk of fertility issues, pregnancy complications, and even systemic inflammation increases. Understanding the evolution of the vaginal microbiota through life stages is crucial for maintaining long-term health.
The Vaginal Microbiome During Puberty
Puberty marks a dramatic hormonal shift that triggers the first major transformation in the vaginal microbiome. As oestrogen levels rise, vaginal tissues begin producing glycogen, which serves as a food source for Lactobacillus bacteria. These bacteria multiply and establish a protective, low-pH environment that inhibits pathogens.
To support microbiome health during adolescence:
- Avoid harsh soaps, scented hygiene products, and douching
- Use pH-balanced cleansers to protect beneficial bacteria
Over-cleansing can disrupt microbial equilibrium, leading to irritation, infections, or recurrent BV in young women.
Reproductive Years: Hormone-Driven Microbial Resilience
In the reproductive phase, oestrogen continues to support a Lactobacillus-dominant environment. This is the microbiome’s most stable period, where balanced flora contribute to:
- Optimal fertility by promoting healthy cervical mucus and reducing inflammation
- Sperm survival and successful conception
- Vaginal immunity and resistance to infections
However, lifestyle factors such as diet, stress, antibiotic use, and hormonal contraceptives can alter microbial composition. A reduction in Lactobacillus levels can raise vaginal pH, increasing vulnerability to pathogenic overgrowth and chronic infections.
Tips to maintain balance:
- Eat a diet rich in fibre, probiotics, and phytonutrients
- Use non-toxic feminine hygiene products
- Manage chronic stress through mindfulness and sleep hygiene
Vaginal Microbiome During Pregnancy
Pregnancy creates a unique microbial state where Lactobacillus species become even more dominant. This shift helps:
- Lower the risk of preterm birth and pregnancy-related infections
- Protect the developing baby from harmful microbes
- Contribute to the newborn’s microbiome during vaginal delivery
A stable vaginal microbiome in pregnancy is associated with:
- Improved birth outcomes
- Lower rates of complications
- Enhanced immune programming in infants
Maintaining microbial health through proper prenatal care, nutrition, and avoiding unnecessary antibiotic exposure is essential.
The Vaginal Microbiome After Menopause
Menopause brings a significant decline in oestrogen, leading to:
- Thinning of vaginal tissue
- Reduction in glycogen levels
- A rise in vaginal pH
- Loss of Lactobacillus dominance
These changes increase susceptibility to:
- Vaginal dryness and irritation
- Recurrent urinary tract infections
- Inflammation and microbiome imbalance
Support strategies include:
- Using probiotic supplements with strains like Lactobacillus crispatus or L. rhamnosus
- Eating phytoestrogen-rich foods (soy, flaxseed, legumes)
- Incorporating vaginal moisturisers and pH-balancing cleansers
How to Maintain a Balanced Vaginal Microbiome
To support vaginal microbiome health at every life stage:
- Avoid douching and harsh feminine cleansers
- Use breathable underwear to reduce excess moisture
- Eat a microbiome-friendly diet rich in fibre, prebiotics, and probiotics
- Reduce stress to stabilise hormonal and immune responses
- Limit unnecessary antibiotic use
- Take targeted vaginal probiotics during hormonal transitions or after illness
Why the Vaginal Microbiome Matters for Longevity
Your vaginal microbiome is not just a reproductive health marker-it plays a critical role in immune regulation, hormonal balance, and metabolic health. A healthy microbial environment supports:
- Protection against chronic infections
- Reduced risk of systemic inflammation
- Improved quality of life during menopause and ageing
Microbial imbalance, especially during menopause, can contribute to inflammaging-a chronic, low-grade inflammation linked to accelerated ageing.
Test Your Vaginal Microbiome with Phenome Longevity
At Phenome Longevity, our Vaginal Microbiome Test gives you a personalised analysis of your microbial composition across life stages. We identify:
- Dominant bacterial species
- Risk factors for dysbiosis, BV, and UTIs
- Insights into how hormonal changes are affecting your vaginal health
This science-backed approach empowers you to take control of your vaginal wellness, from adolescence to menopause-and beyond.
Invest in Lifelong Vaginal Health
A balanced vaginal microbiome is essential to your immune defence, reproductive health, and ageing process. With personalised insights and targeted strategies, you can maintain microbial harmony and protect your health at every stage of life.
Order your Vaginal Microbiome Test today and take the first step toward a healthier future.


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Vaginal Bacteria and Hormones: How Menopause Impacts the Microbiome